satijalab / seurat
R toolkit for single cell genomics
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R toolkit for single cell genomics
R for data science: a book
R's data.table package extends data.frame:
An interactive graphing library for R
Repository for Programming Assignment 2 for R Programming on Coursera
Read flat files (csv, tsv, fwf) into R
📊 A universal enrichment tool for interpreting omics data
Inferring CNV from Single-Cell RNA-Seq
R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
R package for detecting doublets in single-cell RNA sequencing data
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
R Interface to Python
Easily generate information-rich, publication-quality tables from R
Interfaces for HDF5-based Single Cell File Formats
Accurate sample inference from amplicon data with single nucleotide resolution
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
Survival Analysis and Visualization
A Wes Anderson color palette for R